[Master Index]
Index for export/lyngby
Produced by mat2html on Wed Jul 29 15:43:40 2009
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Matlab files in this Directory
lyngby lyngby - lyngby start, Calls lyngby_ui_main
lyngby_baf2_global lyngby_baf2_global - Global variables for Ardekani nuisance F-test
lyngby_baf2_init lyngby_baf2_init - Initialize globals for Ardekani F-test with nuisance
lyngby_baf2_main lyngby_baf2_main - Ardekani's F-test with nuisance estimation
lyngby_baf2_test lyngby_baf2_test - Barbak Ardekani's F-test with nuisance estimation
lyngby_baf_global lyngby_baf_global - Global variables for Ardekani F-test
lyngby_baf_init lyngby_baf_init - Initialize globals for Ardekani F-test
lyngby_baf_test lyngby_baf_test - Barbak Ardekani's F-test
lyngby_bat_global lyngby_bat_global - Global variables for Ardekani t-test
lyngby_bat_init lyngby_bat_init - Initialize globals for Ardekani t-test
lyngby_bat_test lyngby_bat_test - t-test using the Ardekani t-method
lyngby_batch_baf2 lyngby_batch_fg - Batch for Ardekani's F-test with nuisance
lyngby_batch_bmr lyngby_batch_bmr - Batch for Binomial mixture ROC curve
lyngby_batch_cc lyngby_batch_cc - Batch for cross-correlation
lyngby_batch_cons lyngby_batch_cons - Batch for consensus modeling
lyngby_batch_fg lyngby_batch_fg - Batch for Fisher's G harmonic analysis
lyngby_batch_fir lyngby_batch_fir - Batch for singular value decomposition
lyngby_batch_ica lyngby_batch_ica - Batch for independent components analysis
lyngby_batch_prep lyngby_batch_prep - Batch preprocessing
lyngby_cc_global lyngby_cc_global - Global variables for cross-correlation
lyngby_cdf_beta lyngby_cdf_beta - Beta cumulative probability function
lyngby_cdf_bin lyngby_cdf_bin - Binomial distribution function
lyngby_cdf_chi2 lyngby_cdf_chi2 - X^2 cumulated distribution function
lyngby_cdf_f lyngby_cdf_f - Fisher's F distribution
lyngby_cdf_fishersg lyngby_cdf_fishersg - Cumulative distribution for Fisher's g
lyngby_cdf_gauss lyngby_cdf_gauss - Gaussian (normal) distribution function
lyngby_cdf_t lyngby_cdf_t - Student t distribution
lyngby_cdf_wilrank lyngby_cdf_wilrank - "Wilcoxon sign rank" distribution
lyngby_circle lyngby_circle - Draw a circle
lyngby_classerr lyngby_classerr - Classification error
lyngby_cons_global lyngby_cons_global - Consensus global variables declaration
lyngby_cons_init lyngby_cons_init - Consensus global variables initialization
lyngby_cons_main lyngby_cons_main - Consensus modeling
lyngby_corrlin lyngby_corrlin - Lin's concordance correlation coefficient
lyngby_cumperiodo lyngby_cumperiodo - Normalized cumulated periodogram
lyngby_cva lyngby_cva - Canonical variate analysis (Canonical Ridge)
lyngby_datatype2bit lyngby_datatype2bit - Return number of bits for datatype
lyngby_design lyngby_normalize - Normalize in vertical direction of a datamatrix
lyngby_design_events2designlyngby_design_events2design - Convert events to design matrix column
lyngby_dropedge lyngby_dropedge - Drop scans at the paradigm shifts
lyngby_efir_global lyngby_efir_global - Global variables for Exhaustive FIR analysis method
lyngby_efir_init lyngby_efir_init - Initialize global variables for EFIR analysis
lyngby_efir_main lyngby_efir_main - Main exhautive FIR function
lyngby_filefind lyngby_filefind - Find the position of a string in a file
lyngby_filter lyngby_filter - function for averaging volumes
lyngby_fir_convolve lyngby_fir_convolve - Convolve the FIR kernel with the input
lyngby_fir_error lyngby_fir_error - FIR residual signal (Quadratic error)
lyngby_fir_global lyngby_fir_global - Global variables for FIR analysis method
lyngby_fir_init lyngby_fir_init - Initialize global variables for FIR analysis
lyngby_fir_main lyngby_fir_main - Regularized FIR filter, main function
lyngby_fir_masscent lyngby_masscenter - Returns the masscenter of the FIR kernel
lyngby_fir_paradigm2designlyngby_fir_paradigm2design - Paradigm vector to design matrix
lyngby_fir_plot lyngby_fir_plot - Plot paradigm, data and FIR model
lyngby_fir_regmatrixlyngby_fir_regmatrix - Construct regularization matrix
lyngby_fir_test_chi2lyngby_fir_test_chi2 - Chi square test for FIR filter
lyngby_full2mask lyngby_full2mask - Convert indices from Full volume to ROI volume
lyngby_getdata lyngby_getdata - Returns the masked datamatrix
lyngby_getinfo lyngby_getinfo - Get volume info from a file
lyngby_getslice lyngby_getslice - Extracts a slice from a volume
lyngby_getvolume lyngby_getvolume - Get a volume from a file
lyngby_global lyngby_global - File defining global variables
lyngby_gmm_error lyngby_gmm_error - Gaussian mixture model, error
lyngby_gmm_fit lyngby_gmm_fit - Gaussian mixture model, fitting
lyngby_gmm_plot lyngby_gmm_plot - Plot gaussian mixture model
lyngby_histeq lyngby_histeq - Perform histogram equalization
lyngby_ica_bs_est lyngby_ica_bs_est - Bell & Sejnowski ICA estimation
lyngby_ica_global lyngby_ica_global - Global variables for ICA analysis
lyngby_ica_init lyngby_ica_init - Initialize global variables for ICA analysis
lyngby_ica_ms_est lyngby_ica_ms_est - Molgedey-Schuster ICA
lyngby_ica_nbs_est lyngby_ica_nbs_est - Non-symmetric Bell & Sejnowski ICA
lyngby_idf_beta lyngby_idf_beta - Inverse beta culumative probability function
lyngby_idf_chi2 lyngby_idf_chi2 - Invers X^2 distribution function
lyngby_idf_f lyngby_idf_f - Inverse cumulative F distribution.
lyngby_idf_gauss lyngby_idf_gauss - Inverse cumulated Gaussian distribution
lyngby_idf_t lyngby_idf_t - Inverted Student t distribution
lyngby_ikm_bic lyngby_ikm_bic - Bayesian information criterion for K-means
lyngby_ikm_global lyngby_ikm_global - Iterative K-means, Global variables
lyngby_ikm_init lyngby_ikm_init - Iterative K-means, Global variables init.
lyngby_ikm_main lyngby_ikm_main - Iterative K-means clustering
lyngby_ikm_plot_w lyngby_ikm_plot_w - Plot Within variance for iterative K-means
lyngby_image lyngby_image - Plot a slice
lyngby_img_regclean lyngby_img_regclean - cleaning of image
lyngby_img_regident lyngby_img_regindent - Region identification
lyngby_index2tmask lyngby_index2tmask - Return time mask from indices
lyngby_index2vmask lyngby_index2vmask - Return voxel from indices
lyngby_init lyngby_init - Initialize the global variables
lyngby_invlogistic lyngby_invlogistic - Inverse logistic function
lyngby_km_bic lyngby_km_bic - Bayesian information criterion for K-means
lyngby_km_centersim lyngby_km_centersim - K-means center similarity
lyngby_km_error lyngby_km_error - K-means, error
lyngby_km_global lyngby_km_global - K-means, Global variables declarations
lyngby_km_init lyngby_km_init - K-means, Global variables initialization
lyngby_km_loglikelihoodlyngby_km_loglikelihood - Log likelihood of K-means model
lyngby_km_main lyngby_km_main - Main function for K-means clustering
lyngby_km_plot_dist lyngby_km_plot_dist - Plot summary of cluster center similarity
lyngby_km_plot_scat lyngby_km_plot_scat - K-means scattergram of cluster centers
lyngby_km_within lyngby_km_within - K-means within-variance (within intertia)
lyngby_kronadd lyngby_kronadd - Kronecker add
lyngby_ks_global lyngby_ks_global - Global variables for KS analysis method
lyngby_ks_init lyngby_ks_init - Initialize globals for KS-test analysis
lyngby_ks_main lyngby_ks_main - Kolmogorov Smirnov test
lyngby_ks_prob lyngby_ks_prob - Kolmogorov-Smirnov probability
lyngby_ks_test lyngby_ks_test - Kolmogorov-Smirnov test of two arrays.
lyngby_log lyngby_log - Log
lyngby_lz_error lyngby_lz_error - Lange-Zeger residual signal (Quadratic error)
lyngby_lz_lambda lyngby_lz_lambda - The Lange-Zeger hemodynamic response function
lyngby_lz_masscent lyngby_lz_masscenter - Returns the masscenter of the Lange Zeger Kernel
lyngby_lz_plot lyngby_lz_plot - Plot Paradigm, data and Lange-Zeger model
lyngby_lz_plottheta lyngby_lz_plottheta - Plot Lange-Zeger theta1 against theta2
lyngby_lzgs_global lyngby_lzgs_global - Global variables for LZ Grid Search analysis
lyngby_lzgs_init lyngby_lzgs_init - Initialize global variables for LZGS
lyngby_lzgs_main lyngby_lzgs_main - Lange-Zeger model with grid search
lyngby_lzgs_search lyngby_lzgs_search - Lange Zeger main algorithm for grid search
lyngby_lzit_algo lyngby_lzit_algo - Lange-Zeger, optimization of model
lyngby_lzit_beta lyngby_lzit_beta - Lange-Zeger, Estimate beta parameter
lyngby_lzit_conv lyngby_lzit_conv - Lange-Zeger, Convolve kernel with the input
lyngby_lzit_cost lyngby_lzit_cost - The cost function used in the Lange-Zeger model
lyngby_lzit_ftlamb lyngby_lzit_ftlamb - Lange-Zeger, Fourier transformed of lambda
lyngby_lzit_global lyngby_lzit_global - Global variables for iterative LZ
lyngby_lzit_init lyngby_lzit_init - Initialize global variables for iterative LZ
lyngby_lzit_main lyngby_lzit_main - Main function for Lange-Zeger estimation
lyngby_lzit_noise lyngby_lzit_noise - Noise estimate in the Lange-Zeger model
lyngby_lzit_pickf lyngby_lzit_pickf - Pick frequencies out from the data matrix
lyngby_lzit_thopt lyngby_lzit_thopt - Lange-Zeger, Optimize theta parameters
lyngby_mask2full lyngby_mask2full - Convert indices from ROI to Full volume
lyngby_meangeo lyngby_meangeo - Geometric mean
lyngby_meanhl lyngby_meanhl - Hodges-Lehmann estimator
lyngby_mkm_global lyngby_mkm_global - Meta K-means, Global variables declaration
lyngby_mkm_init lyngby_mkm_init - Meta K-means, Global variables initialization
lyngby_mod lyngby_mod - Modulus function
lyngby_msvd_main lyngby_msvd_main - Perform meta svd comparison of selected models.
lyngby_nn_ccdc lyngby_nn_ccdc - NN-classifier cost function and derivative
lyngby_nn_cddevds lyngby_nn_cddevds - 2nd order, entropic, input, diag. sym.
lyngby_nn_cddewda lyngby_nn_cddewda - Classifier neural network, output, diag 2nd
lyngby_nn_cddewds lyngby_nn_cddewds - Classifier neural network, output, diag 2nd
lyngby_nn_cddru lyngby_nn_cddru - 2nd order der. of regularization for weights
lyngby_nn_cdev lyngby_nn_cdev - Classifier neural network, input 1st der.
lyngby_nn_cdew lyngby_nn_cdew - Classifier neural network, output 1st der.
lyngby_nn_cdru lyngby_nn_cdru - Neural network, regularization, 1st der.
lyngby_nn_cerror lyngby_nn_cerror - Classifier neural network error
lyngby_nn_cforward lyngby_nn_cforward - Classifier neural network forward
lyngby_nn_cmain lyngby_nn_cmain - Main functions for classifier neural network
lyngby_nn_cost lyngby_nn_cost - Cost function = error + regularization
lyngby_nn_cpruneobd lyngby_nn_cpruneobd - Classifier neural network, OBD pruning
lyngby_nn_csoftline lyngby_nn_csoftline - Classifier neural network soft linesearch
lyngby_nn_csoftmax lyngby_nn_csoftmax - Softmax for neural network classifier
lyngby_nn_ctrain lyngby_nn_ctrain - Classifier neural network training
lyngby_nn_eddevds lyngby_nn_eddevds - 2nd order, entropic, input, diag. sym.
lyngby_nn_eddewd lyngby_nn_eddewd - Entropic neural network, output, diag 2nd
lyngby_nn_eddru lyngby_nn_eddru - 2nd order der. of regularization for weights
lyngby_nn_edev lyngby_nn_edev - Entropic neural network, input 1st der.
lyngby_nn_edew lyngby_nn_edew - Entropic neural network, output, 1st der.
lyngby_nn_edru lyngby_nn_edru - First order derivative, Regularization
lyngby_nn_eehl lyngby_nn_eehl - Neural network entropic error (Hodge-Lehmann)
lyngby_nn_eemedian lyngby_nn_eemedian - Neural network entropic error (median)
lyngby_nn_eerror lyngby_nn_eerror - Calculate (cross-)entropic error
lyngby_nn_eforward lyngby_nn_eforward - Entropic neural network, feed-forward
lyngby_nn_emain lyngby_nn_emain - Main function for Entropic Neural network
lyngby_nn_epruneobd lyngby_nn_epruneobd - Pruning by Optimal Brain Damage (entropic)
lyngby_nn_esoftline lyngby_nn_esoftline - Soft linesearch with the entropic cost function
lyngby_nn_etarget lyngby_nn_etarget - Normalize target for entropic neural network
lyngby_nn_etrain lyngby_nn_etrain - Entropic neural network, training
lyngby_nn_initvw lyngby_nn_initvw - Initialize weights in neural network
lyngby_nn_plotnet lyngby_nn_plotnet - Neural network, plot the network weights
lyngby_nn_pruneobd lyngby_nn_pruneobd - Pruning by Optimal Brain Damage
lyngby_nn_qddeus lyngby_nn_qddeus - 2nd der., quad., all weights, gauss approx.
lyngby_nn_qddevds lyngby_nn_qddevds - 2nd der., quadratic, input, diag gauss.
lyngby_nn_qddevs lyngby_nn_qddevs - 2nd der., quadratic, input, gauss approx.
lyngby_nn_qddewds lyngby_nn_qddewds - 2nd order der, quadratic, output, diag gauss
lyngby_nn_qddews lyngby_nn_qddews - 2nd. order der., quadratic, output, gauss approx.
lyngby_nn_qddru lyngby_nn_qddru - 2nd order der. of regularization for weights
lyngby_nn_qdev lyngby_nn_qdev - Quadratic neural network, input, 1st der.
lyngby_nn_qdew lyngby_nn_qdew - First order derivative, quadratic, Output weights
lyngby_nn_qdru lyngby_nn_qdru - Quadratic neural network, 1st der. reg.
lyngby_nn_qerror lyngby_nn_qerror - Quadratic error
lyngby_nn_qforward lyngby_nn_qforward - Neural network forward with linear output function
lyngby_nn_qmain lyngby_nn_qmain - Main function for quadratic neural network
lyngby_nn_qpruneobd lyngby_nn_qpruneobd - Pruning by Optimal Brain Damage (quadratic)
lyngby_nn_qsoftline lyngby_nn_esoftline - Soft linesearch with the quadratic costfunction
lyngby_nn_qtrain lyngby_nn_qtrain - Quadratic neural network, training
lyngby_nn_reg2reg lyngby_nn_reg2reg - Standardize regularization
lyngby_nn_setsplit lyngby_nn_setsplit - Split the data into training and validation set
lyngby_nn_tanh lyngby_nn_tanh - Faster hyperbolic tangent
lyngby_nn_u2vw lyngby_nn_u2vw - Vectorize neural network weights
lyngby_nn_vw2u lyngby_nn_vw2u - Vectorize neural network weights
lyngby_nnr_global lyngby_nnr_global - Global variables for NNR analysis method
lyngby_nnr_init lyngby_nnr_init - Initialize global variables for NNR analysis
lyngby_nnr_main lyngby_nnr_main - Main function for Neural network Regression
lyngby_nns_esalmap lyngby_nns_esalmap - Saliency map with entropic cost function
lyngby_nns_global lyngby_nns_global - Global variables for NNS analysis
lyngby_nns_init lyngby_nns_init - Initialize global variables for NNS analysis
lyngby_nns_main lyngby_nns_main - Main function for Neural network saliency
lyngby_normalize lyngby_normalize - Normalize (Preprocess) a datamatrix
lyngby_numscans lyngby_numscans - Returns the masked number of scans volume
lyngby_opls lyngby_opls - Orthonormalized PLS
lyngby_opt_cg lyngby_opt_cg - Rasmussen/Goutte's conjugate gradient minimization
lyngby_opt_gradient lyngby_opt_gradient - Optimization with Gradient minimization
lyngby_paradigm lyngby_paradigm - Returns the paradigm
lyngby_pca_eqtest lyngby_pca_eqtest - PCA test for equal eigenvalues
lyngby_pca_main lyngby_pca_main - Main PCA analysis
lyngby_pcafilter lyngby_pcafilter - Reduce the dimension or filter a matrix with PCA filtering
lyngby_pde_binmix lyngby_pde_binmix - Estimation of binomial mixture model
lyngby_pde_binmix_derlyngby_pde_binmix_der - Derivative of the binomial mixture
lyngby_pde_binmix_lllyngby_pde_binmix_ll - Loglikelihood of mixture of binomials
lyngby_pdf_beta lyngby_pdf_beta - Beta probability density function
lyngby_pdf_bin lyngby_pdf_bin - Binomial probability density function
lyngby_pdf_f lyngby_pdf_f - F probability density function
lyngby_pdf_gamma lyngby_pdf_gamma - Gamma distribution density
lyngby_pdf_gauss lyngby_pdf_gauss - Gaussian (normal) density function
lyngby_pdf_poisson lyngby_pdf_poisson - Poisson probability density function
lyngby_plot_boxplot lyngby_plot_boxplot - Box plot
lyngby_plotfilter lyngby_plotfilter - Plot FIR response
lyngby_plotmatch lyngby_plotmatch - Plot paradigm, data and model
lyngby_pois_error lyngby_pois_error - Poisson residual signal (Quadratic error)
lyngby_pois_forward lyngby_pois_forward - Possion kernel forward (prediction)
lyngby_pois_forwn lyngby_pois_forwn - Possion kernel forward (prediction)
lyngby_pois_global lyngby_pois_global - Poisson filter, Global variables
lyngby_pois_init lyngby_pois_init - Poisson filter, Initialize global variables
lyngby_pois_main lyngby_pois_main - Main function for Possion filter
lyngby_pois_toptim lyngby_pois_toptim - Possion kernel optimization
lyngby_prep_detrend lyngby_prep_detrend - Detrending
lyngby_prep_global lyngby_prep_global - Global variables for preprocessing
lyngby_prep_init lyngby_prep_init - Initialize global variables for preprocessing
lyngby_read_ana4d lyngby_read_ana4d - Reads a 4D dimensional ANALYZE file
lyngby_read_analyze lyngby_read_analyze - Reads an ANALYZE file
lyngby_read_header lyngby_read_header - Reads header information of a volume file
lyngby_read_sdt lyngby_read_sdt - Read a Stimulate SDT/SPR file
lyngby_read_vapet lyngby_read_vapet - Read a 3D VAPET file
lyngby_read_vapet4d lyngby_read_vapet4d - Read a 4D VAPET file
lyngby_read_volume lyngby_read_volume - Reads a volume from a recognized file
lyngby_read_volumes lyngby_read_volumes - Reads volumes from files
lyngby_readanahdr lyngby_readanahdr - Reads an ANALYZE header
lyngby_readanavol lyngby_readanavol - Reads an ANALYZE img file
lyngby_readvahdr4 lyngby_readvahdr4 - Reads the header information in a 4 dimensional VAPET file
lyngby_readvapethdr lyngby_readvapethdr - Reads the header information in a VAPET file
lyngby_readvapetvol lyngby_readvapetvol - Reads a VAPET volume from a file
lyngby_readvavol4 lyngby_readvavol4 - Reads a 4 dimensional VAPET structure from a file
lyngby_readxpihdr lyngby_readxpihdr - Read header from EC flexible format
lyngby_readxpivol lyngby_readxpivol - Read data from EC flexible (Xprime) format
lyngby_roi lyngby_roi - Returns the begin and end index of the volume
lyngby_roi2vmask lyngby_roi2vmask - Transform ROI definition to masking matrix
lyngby_run lyngby_run - Returns the run specification
lyngby_runinfo lyngby_runinfo - Number of runs and scans within runs
lyngby_scva_global lyngby_scva_global - Global variables for SCVA analysis
lyngby_scva_init lyngby_scva_init - Initialize global variables for SCVA analysis
lyngby_scva_main lyngby_scva_main - Strother Canonical variate analysis
lyngby_sdesign lyngby_sdesign - Strother design matrix
lyngby_set_and lyngby_set_and - set intersection: S1 /\ S2
lyngby_set_diff lyngby_set_diff - set difference: S1 \ S2
lyngby_set_unique lyngby_set_unique - Set thining: all elements different
lyngby_sliceindex lyngby_sliceindex - Returns indices for a specified slice
lyngby_sop_global lyngby_sop_global - Global variables for SOP analysis
lyngby_sop_init lyngby_sop_init - Initialize global variables for SOP analysis
lyngby_sop_main lyngby_sop_main - Strother OPLS
lyngby_sopressvd lyngby_sopressvd - SOP with SVD on the residual
lyngby_splitonoff lyngby_splitonnoff - Function to find the indices of the on/off scans.
lyngby_spm_xyz2ind lyngby_spm_xyz2ind - Convert SPM XYZ structure to voxel indices
lyngby_svd lyngby_svd - Singular value decomposition
lyngby_svd_global lyngby_svd_global - Global variables for SVD analysis
lyngby_svd_init lyngby_svd_init - Initialize global variables for SVD analysis
lyngby_svdfilter lyngby_svdfilter - Filtering by SVD
lyngby_swaporder lyngby_swaporder - Swap the xyz order in a volume
lyngby_talaimg lyngby_talaimg - Returns Talairach brain plot in the style of SPM
lyngby_test_fishersglyngby_test_fishersg - Test with Fisher's g
lyngby_test_wilrank lyngby_test_wilrank - Wilcoxon sign rank test
lyngby_tmask2index lyngby_tmask2index - Return time mask from indices
lyngby_ts_ftest lyngby_ts_ftest - F-test for two samples.
lyngby_ts_global lyngby_ts_global - Global variables for TS analysis method
lyngby_ts_init lyngby_ts_init - Initialize globals for t-test analysis method
lyngby_ts_main lyngby_ts_main - Whole volume Student's t-test for equal variances.
lyngby_ts_pttest lyngby_ts_pttest - Student's paired t-test.
lyngby_ts_ttest lyngby_ts_ttest - Two sample Student t test, equal variances.
lyngby_ts_uttest lyngby_ts_uttest - Student's t-test for unequal variances.
lyngby_ui_baf2_init lyngby_ui_baf2_init - Ardekani's nuisance F-test, init. of param.
lyngby_ui_baf_init lyngby_ui_baf_init - Ardekani's F-test, GUI for init. of param.
lyngby_ui_bat_init lyngby_ui_bat_init - Initialization for Ardekani's t-test
lyngby_ui_cc_init lyngby_ui_cc_init - User interface for init. of cross-correlation
lyngby_ui_cc_view lyngby_ui_cc_view - User interface for viewing Cross-correlation results
lyngby_ui_cons_init lyngby_ui_cons_init - Initialization for Consensus modeling
lyngby_ui_credit lyngby_ui_credit - Display a credit
lyngby_ui_efir_init lyngby_ui_efir_init - UI for initialization of EFIR model
lyngby_ui_externals lyngby_ui_externals - Window for editing/creating external
lyngby_ui_fir_init lyngby_ui_fir_init - User interface for FIR filter analysis
lyngby_ui_global lyngby_ui_global - Defines global for the user interface
lyngby_ui_ica_init lyngby_ui_ica_init - GUI for initialization of ICA model
lyngby_ui_ikm_init lyngby_ui_ikm_init - GUI for Iterative K-means initialization
lyngby_ui_km_init lyngby_ui_km_init - GUI for K-means parameter initialization
lyngby_ui_ks_init lyngby_ui_ks_init - KS, GUI for initialization of parameters
lyngby_ui_loadfile lyngby_ui_loadfile - Opens a window for specifying file parameters
lyngby_ui_lz_init lyngby_ui_lz_init - Lange-Zeger GUI init of parameters
lyngby_ui_main lyngby_ui_main - Main function for the GUI for lyngby
lyngby_ui_lzgs_init lyngby_ui_lzgs_init - Lange-Zeger GUI init of parameters
lyngby_ui_lzit_init lyngby_ui_lzit_init - GUI for iterative Lange-Zeger initialization
lyngby_ui_message lyngby_ui_message - Display a message
lyngby_ui_mkm_init lyngby_ui_mkm_init - GUI for Meta K-means initialization
lyngby_ui_movie lyngby_ui_movie - User interface for movie
lyngby_ui_nnr_init lyngby_ui_nnr_init - User interface for NNR method
lyngby_ui_nns_init lyngby_ui_nns_init - GUI for Neural network saliency
lyngby_ui_option lyngby_ui_option - Option/setup for user interface
lyngby_ui_para_draw lyngby_ui_para_draw - User interface for paradigm viewing (and specification)
lyngby_ui_paradigm lyngby_ui_paradigm - User interface for paradigm viewing and editing
lyngby_ui_pois_init lyngby_ui_pois_init - GUI, Poisson filter, initialization
lyngby_ui_preproc lyngby_ui_preproc - UI for setting up preprocessing parameters
lyngby_ui_preproc_detrendlyngby_ui_preproc_detrend - UI for setting up preprocessing parameters
lyngby_ui_preproc_dtplotlyngby_ui_preproc_dtplot - User interface for time mask specification
lyngby_ui_preproc_dummylyngby_ui_preproc_dummy - UI for setting up preprocessing parameters
lyngby_ui_preproc_normalizelyngby_ui_preproc_normalize - UI for setting up preprocessing parameters
lyngby_ui_resinfo lyngby_ui_resinfo - Defines global for the user interface
lyngby_ui_run lyngby_ui_run - User interface for run viewing/specification
lyngby_ui_run_no lyngby_ui_run_no - User interface for run specification
lyngby_ui_saveresultlyngby_ui_saveresult - Opens a window for specifying file parameters.
lyngby_ui_scva_init lyngby_ui_scva_init - GUI for init of Strother CVA
lyngby_ui_sop_init lyngby_ui_sop_init - GUI of init. of SOP model
lyngby_ui_svd_init lyngby_ui_svd_init - GUI for initialization of SVD model
lyngby_ui_time lyngby_ui_time - User interface for time mask specification
lyngby_ui_time_be lyngby_ui_time_be - User interface for time mask specification
lyngby_ui_ts_init lyngby_ui_ts_init - Initialization of t-test
lyngby_ui_view lyngby_ui_view - User interface for viewing results
lyngby_ui_view_baf lyngby_ui_view_baf - Viewing Ardekani F-test results
lyngby_ui_view_baf2 lyngby_ui_view_baf2 - Viewing function for Ardekani's nuisance F
lyngby_ui_view_bat lyngby_ui_view_bat - Viewing Ardekani t-test results
lyngby_ui_view_cc lyngby_ui_view_cc - Viewing Cross-correlation results
lyngby_ui_view_cons lyngby_ui_view_cons - Consensus viewing function
lyngby_ui_view_detrendlyngby_ui_view_dfl - Detrended data viewing function
lyngby_ui_view_dfl lyngby_ui_view_dfl - Default viewing function
lyngby_ui_view_efir lyngby_ui_view_efir - Viewing Exhaustive FIR filter results
lyngby_ui_view_fir lyngby_ui_view_fir - Viewing FIR filter results
lyngby_ui_view_ica lyngby_ui_view_ica - ICA viewing function
lyngby_ui_view_ikm lyngby_ui_view_ikm - Viewing Iterative K-means filter results
lyngby_ui_view_km lyngby_ui_view_km - Viewing K-means filter results
lyngby_ui_view_ks lyngby_ui_view_ks - Kolmogorov-Smirnov viewing function
lyngby_ui_view_lzgs lyngby_ui_view_lzgs - Viewing Lange Zeger grid search results
lyngby_ui_view_lzit lyngby_ui_view_lzit - Viewing Lange Zeger results
lyngby_ui_view_mkm lyngby_ui_view_mkm - Viewing of meta K-means results
lyngby_ui_view_nnr lyngby_ui_view_nnr - Viewing NNR filter results
lyngby_ui_view_nns lyngby_ui_view_nns - Viewing of NNS results
lyngby_ui_view_pois lyngby_ui_view_pois - Viewing poisson filter results
lyngby_ui_view_scva lyngby_ui_view_scva - Viewing function for Strother CVA
lyngby_ui_view_sop lyngby_ui_view_sop - Viewing for Strother OPLS
lyngby_ui_view_svd lyngby_ui_view_svd - Viewing for Strother OPLS
lyngby_ui_view_ts lyngby_ui_view_ts - t-test viewing function
lyngby_ui_viewvol lyngby_ui_viewvol - View full volume timeserie and specify ROI and voxelmask
lyngby_ui_volume lyngby_ui_volume - View full volume timeserie and specify mask
lyngby_ui_voxelmask lyngby_ui_voxelmask - User interface for voxelmask editing
lyngby_uis_baf lyngby_uis_baf - Script executed for Ardekani's F-test
lyngby_uis_baf2 lyngby_uis_baf2 - Script executed for Ardekani's nuisance F
lyngby_uis_baf2_v lyngby_uis_baf2_v - Script for Arkani's F-test with nuisance view
lyngby_uis_baf_v lyngby_uis_baf_v - Script for Ardekani F-test view
lyngby_uis_bat lyngby_uis_bat - Script executed for Ardekani's t-test
lyngby_uis_bat_v lyngby_uis_bat_v - Script for Ardekani't t-test view
lyngby_uis_cc lyngby_uis_cc - Script executed for cross-correlation anal.
lyngby_uis_cc_v lyngby_uis_cc_v - Script for cross-correlation view
lyngby_uis_cons lyngby_uis_cons - Script executed for consensus
lyngby_uis_cons_v lyngby_uis_cons_v - Script for Consensus viewing
lyngby_uis_efir lyngby_uis_efir - Script executed at the EFIR analysis
lyngby_uis_efir_v lyngby_uis_efir_v - Script for 'exhaustive FIR' viewing
lyngby_uis_fir lyngby_uis_fir - Script executed at the FIR analysis
lyngby_uis_fir_v lyngby_uis_fir_v - Script for FIR view
lyngby_uis_ica lyngby_uis_ica - Script executed for ICA
lyngby_uis_ica_v lyngby_uis_ica_v - Script for ICA view
lyngby_uis_ikm lyngby_uis_ikm - Script executed for iterative K-means
lyngby_uis_ikm_v lyngby_uis_ikm_v - Script for Iterative K-means view
lyngby_uis_km lyngby_uis_km - Script executed for K-means analysis
lyngby_uis_km_v lyngby_uis_km_v - Script for K-means view
lyngby_uis_ks lyngby_uis_ks - Script executed for Kolmogorov-Smirnoff
lyngby_uis_ks_v lyngby_uis_ks_v - Script for Kolmogorov-Smirnov view
lyngby_uis_lzgs lyngby_uis_lzgs - Script executed for Lange-Zeger Grid Search
lyngby_uis_lzgs_v lyngby_uis_lzgs_v - Script for Lange-Zeger gridsearch view
lyngby_uis_lzit lyngby_uis_lzit - Script executed for Lange-Zeger, Iterative
lyngby_uis_lzit_v lyngby_uis_lzit_v - Script for Lange-Zeger 'iterative' view
lyngby_uis_mkm lyngby_uis_mkm - Script executed for Meta K-means analysis
lyngby_uis_mkm_v lyngby_uis_mkm_v - Script for Meta K-means viewing
lyngby_uis_nnr lyngby_uis_nnr - Script executed for Neural network regression
lyngby_uis_nnr_v lyngby_uis_nnr_v - Script for neural network regression view
lyngby_uis_nns lyngby_uis_nns - Script executed for Neural network saliency
lyngby_uis_nns_v lyngby_uis_nns_v - Script for neural network saliency view
lyngby_uis_none_v lyngby_uis_none_v - Script for 'original' view
lyngby_uis_pois lyngby_uis_pois - Script executed for Poisson filter analysis
lyngby_uis_pois_v lyngby_uis_pois_v - Script for Poisson filter view
lyngby_uis_pp_detrend_vlyngby_uis_pp_detrend_v - Script for viewing of detrended data
lyngby_uis_scva lyngby_uis_scva - Script executed for SCVA analysis
lyngby_uis_scva_v lyngby_uis_scva_v - Script for SCVA view
lyngby_uis_sop lyngby_uis_sop - Script executed for SOP analysis
lyngby_uis_sop_v lyngby_uis_sop_v - Script for SOP view
lyngby_uis_svd lyngby_uis_svd - Script executed for SVD analysis
lyngby_uis_svd_v lyngby_uis_svd_v - Script for SVD view
lyngby_uis_ts lyngby_uis_ts - Script executed for t-test analysis
lyngby_uis_ts_v lyngby_uis_ts_v - Script for t-test view
lyngby_vmask2index lyngby_vmask2index - Return Indices from voxel mask
lyngby_write_ana lyngby_write_ana - Write a volume to ANALYZE files
lyngby_write_sdt lyngby_write_sdt - Write a volume/datamatrix to SDT/SPR file
lyngby_write_vapet lyngby_write_vapet - Write a volume to VAPET file
lyngby_write_volumeslyngby_write_volumes - Write volumes to file
lyngby_xcorr lyngby_xcorr - Cross correlation/covariance