Home > brede > brede_ta2_concortex.m

brede_ta2_concortex

PURPOSE ^

brede_ta2_concortex - Construct 3D Talairach contours of cortex

SYNOPSIS ^

function hh = brede_ta2_concortex(varargin)

DESCRIPTION ^

 brede_ta2_concortex  - Construct 3D Talairach contours of cortex

       function h = brede_ta2_concortex( ...
           'PropertyName', 'PropertyValue')

       Property: Color     [ {[0 0 1]} | 3 reals ] Color of the contour.
                 LineWidth [ {5} | integer ] LineWidth
                 ZInclude  Which transversal slices to
                           include. Should be specified in meters  

       This function contruct the transversal cortex contours from
       the Talairach atlas. The contour follows the middle of the
       (blue) cortex. The contour of the left cortex from the atlas
       is mirrored to the right side of the brain.

       The contour data is read from a text file in the 'data'
       directory of brede: 'data/brede_tal_concort1.txt'. This file
       contains a digitization of the cortex based on left outline of
       the transversal images. It does not include all the contour of
       the cortex - only the the major connected components.

       The following transversal slices are defined (in millimeter): 
 
          -40 -36 -32 -28 -24 -20 -16 -12 -8 -4 -1  
          1 4 8 12 16 20 24 28 32 35 40 45 50 55 60 65


       Example:
         figure, brede_ta2_concortex

         figure, brede_ta2_frame
         brede_ta2_concortex('zinclude', [0.001 0.065]);

         figure
         brede_ta2_concortex('linewidth', 2, 'color', [1 0 0])

         % The digitized data is available as
         f = fullfile(fileparts(which('brede')), 'data', 'brede_tal_concort1.txt') 
         coord = load(f)
 
       See also BREDE, BREDE_TA2, BREDE_TA2_FRAME,
                BREDE_TA3_CONCORTEX, BREDE_VTA_CONTOUR.

 $Id: brede_ta2_concortex.m,v 1.2 2005/02/05 18:37:31 fnielsen Exp $

CROSS-REFERENCE INFORMATION ^

This function calls: This function is called by:
Generated on Fri 27-Nov-2009 18:11:22 by m2html © 2005